Insertion junction: CLIP2.054896_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054896
Chromosome:chromosome 11
Location:1830919
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467500 (1 of 1) PF05664 - Plant family of unknown function (DUF810) (DUF810) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGCGACGGCATACGGAACATGTTACCTGAAGACGTGTGTGT
Internal bar code:CAAGTAGGGAGTAATTTGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1221
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTGGGGTGATTCTTTCA
Suggested primer 2:CGCGTGTGTGTGTAAGCAAA