Insertion junction: CLIP2.054898_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054898
Chromosome:chromosome 6
Location:3234598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276950 HTA24,HTA1 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGTGCTGGAGTACCTGACTGCTGAGGTGCTCGAGCTGGCCGGCAAC
Internal bar code:AGCTTCCTACGACTGATTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4408
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTAGGTGGTGTCGCAGAA
Suggested primer 2:GAGCGGTTGTTTGACCCAAC