Insertion junction: CLIP2.054918_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054918
Chromosome:chromosome 1
Location:2843183
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017600 PQQ2 (1 of 8) IPR011047//IPR018391 - Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat; Putative quinoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTAATGCTTATACACAGCAGGCAGGAGACTGCCCCTTGTCCCTGCGA
Internal bar code:TGCTCAAAGCTACTGTATTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1461
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGATTGAACCGTCGGCA
Suggested primer 2:AATGACTGCCTACTGTGCCC