Insertion junction: CLIP2.054922_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054922
Chromosome:chromosome 12
Location:5852744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533300 SRE2 Pre-mRNA splicing factor, SR-related; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGCAGGCTCCGAATTCTAGTTCCCAAGTAGGCACTCGCGCGCTCTT
Internal bar code:GCCATTGACCAACATAATTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1595
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGAGCGACCCAGTTGAAG
Suggested primer 2:CGTGGTATCTGTCTGGCCTG