Insertion junction: CLIP2.054923_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054923
Chromosome:chromosome 1
Location:5225422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036600 EXN3 (1 of 2) K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70); Exoribonuclease II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCTTCACTGGGTCCGCCTCCCCAGAGGCCGACTTCGCCGCCTTGCGC
Internal bar code:TATTGTCGATATTGGTGAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1431
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGCCTTTGTCTGGGAGT
Suggested primer 2:CGCTGCCTACATGTACCGAT