Insertion junction: CLIP2.054923_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054923
Chromosome:chromosome 1
Location:5225427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036600 EXN3 (1 of 2) K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70); Exoribonuclease II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGCGGGCAAGGCGGCCCCCGCGACGGCAGCAGCGGGGACAGCGGCGG
Internal bar code:GCGTGAGTTTGCAGAGTGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2413
LEAP-Seq percent confirming:83.9286
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGCCTACATGTACCGAT
Suggested primer 2:CGAAGCCTTTGTCTGGGAGT