Insertion junction: CLIP2.054927_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054927
Chromosome:chromosome 1
Location:6343221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044900 (1 of 5) PTHR10351:SF42 - LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTAGGGGGCCGGTCGGACAGGCAAGTCGCGCCCGGAATTCAGGCATG
Internal bar code:TATAAAGCGGTTGTGGGTACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1340
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGAGGCCTTGGTTCTCT
Suggested primer 2:CGCCGCTCGATCTTCTTAGT