Insertion junction: CLIP2.054936_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054936
Chromosome:chromosome 10
Location:6208628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g463026 (1 of 1) IPR001202//IPR001752//IPR027417//IPR027640 - WW domain // Kinesin motor domain // P-loop containing nucleoside triphosphate hydrolase // Kinesin-like protein; Large protein with small region (p-loop?) Similar to kinesin (peptide is unique) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAACCCCCCCCCGCGCACAGCAACTCGGAGACGGGCGAGGCGCTGCCC
Internal bar code:TCTGGCGCAGGCAATTCCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1180
LEAP-Seq percent confirming:95.3846
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCGAGTGAGTGTGTGAT
Suggested primer 2:GCTCTATTGCACTGCGTTCG