Insertion junction: CLIP2.054940_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054940
Chromosome:chromosome 9
Location:5328246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407550 (1 of 1) IPR000104//IPR003034 - Antifreeze protein, type I // SAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGTCGAAGCGGATGCCGCTGCCGCTGCCACTCCAGCCGCCGCCGCCG
Internal bar code:TCGTAGTGATTTTCTTGGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2234
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTTCAAGAGCGTCTCAG
Suggested primer 2:TTATGTCGGGCTTGACCACC