Insertion junction: CLIP2.054952_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054952
Chromosome:chromosome 7
Location:2188301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327050 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGTGCACAAACACCGGGCCACCGCTACTGCCACTGCTGCTGCCACTG
Internal bar code:ACGTTCCAGCAGGTTAGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3663
LEAP-Seq percent confirming:47.1698
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACGTATTTGCAAGCGAT
Suggested primer 2:TTTCCCGCTTCCATCTGTCC