Insertion junction: CLIP2.054965_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054965
Chromosome:chromosome 15
Location:450336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635750 (1 of 1) IPR003613//IPR016024 - U box domain // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCATGCATCATGGAACCCCTCCCCCTCCCCCGCCCTGGCCGCAGGTGG
Internal bar code:TTAGTGCCACTCTAGGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:351
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACTCACTGCCTCAACAT
Suggested primer 2:TCAGGGGGATGTCGTGTTTG