Insertion junction: CLIP2.054977_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054977
Chromosome:chromosome 17
Location:692242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700650 GFY2 (1 of 5) PTHR30178 - INNER MEMBRANE PROTEIN YAAH; Putative acetate transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAGTAGTCAAACATCAAGAAGCAGCAGCCGTGAGGACTTCACGATGTC
Internal bar code:TTTCGTCGGATGTGATATACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1288
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAACCCGCCCTATACCCA
Suggested primer 2:CTAGGATGCTCAGACGCAGG