Insertion junction: CLIP2.054978_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054978
Chromosome:chromosome 2
Location:5347979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113400 PACRG1,PACRG,BUG21 Parkin Co-Regulated Gene Protein; (1 of 1) PTHR21207:SF2 - PARKIN COREGULATED GENE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAAAGCTCCACCTGCAGCTAACCTATCCGGGACAGGCTCGGTAAGGC
Internal bar code:CATTTTTTTTGTAAATTCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGAAGTGTAGGGCTGGG
Suggested primer 2:GCTATGCGCTTGTACTGTGC