Insertion junction: CLIP2.054985_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054985
Chromosome:chromosome 5
Location:2287561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238140 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTATAACCTAGGGCGCCGGCAGGGCGCGGCGGTGTAGTTGCGGTAGGC
Internal bar code:TTTTCTTCTTCTTTCCATAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2953
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCAACAGGTTTTACCGC
Suggested primer 2:CTGTGTTCCAGGTGGGTCTC