Insertion junction: CLIP2.054990_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.054990
Chromosome:chromosome 12
Location:484470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494500 LF2,CDKI1 Cyclin dependent kinase; (1 of 1) PTHR24056//PTHR24056:SF171 - CELL DIVISION PROTEIN KINASE // CYCLIN-DEPENDENT KINASE 20 3'UTR_intron
Cre12.g801345 (1 of 1) IPR002200 - Elicitin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGGACCAAGCGGCCGGTAGCCAGAGTCGTGTACGCAAGATTGTGCGGA
Internal bar code:TCTTGTGTGGGATTGAACTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1017
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGGGAAGCGCATTAAG
Suggested primer 2:CATGCAACGCTAGATGGCAC