Insertion junction: CLIP2.054997_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054997
Chromosome:chromosome 6
Location:4133719
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278229 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGGTGGCGGTGGCGATGCGGCGGTGGCGAGCCGGCAGCCCACGCC
Internal bar code:ACGAGTACTCTTGGTCGCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4184
LEAP-Seq percent confirming:65.5172
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTGCTCGAGGACATGAG
Suggested primer 2:ACCGATGAACAACGACGGAA