Insertion junction: CLIP2.055001_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055001
Chromosome:chromosome 17
Location:5169238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736750 (1 of 2) PTHR22640//PTHR22640:SF2 - UNCHARACTERIZED // STRUCTURAL MAINTENANCE OF CHROMOSOMES FLEXIBLE HINGE DOMAIN-CONTAINING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACGGTGTTGGTGGGCGACAGCGGCACGGACACCAAGACGTGGCTCAA
Internal bar code:AGTGTGAAGAAAAGGGGAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1932
LEAP-Seq percent confirming:92.1053
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGATGGCCATCTTGACC
Suggested primer 2:TGCTGCGCGAGTATAAGGAG