Insertion junction: CLIP2.055011_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055011
Chromosome:chromosome 8
Location:185875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800885 (1 of 2) PF13875 - Domain of unknown function (DUF4202) (DUF4202) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCTCCGTTACACACCCATGCTCCTGCATCCCTTGTGCTACTGCCTCC
Internal bar code:GTTATCGTGACTTTTCATGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2109
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACCTACCCCTCCTAACC
Suggested primer 2:TCCACGTTCCATACCCTCCT