Insertion junction: CLIP2.055017_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055017
Chromosome:chromosome 6
Location:4350339
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278269 SCC2 (1 of 1) K06672 - cohesin loading factor subunit SCC2 (SCC2, NIPBL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACCTGTGGCCCGCGTTGCCGCCTGCCTGGAGGCTGTCCTATGTGAG
Internal bar code:TGAGGGTGACGGTACACAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:13.6364
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTGGCGGGCATTCAAAA
Suggested primer 2:GCAGACAACTCGGAACAGGA