Insertion junction: CLIP2.055018_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055018
Chromosome:chromosome 6
Location:1645780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262000 SNR5 SNARE-associated Golgi protein; (1 of 6) PF09335 - SNARE associated Golgi protein (SNARE_assoc) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACCGGCATGGCGTTCCCCTTAAACCTCAACCCTGAAGTGCTGCCCTT
Internal bar code:AATCATTGTATTTTCTCTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATACCCTGGACCTGCCT
Suggested primer 2:CCAACTCGCGTTTGCATGAA