Insertion junction: CLIP2.055021_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055021
Chromosome:chromosome 3
Location:6794949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197050 HTV2 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCTCAACACGCTCGGGCTTGATGCCCGCGGCAGTGGCCCTGGTGGGA
Internal bar code:TTTCACAGTGCCGATTATCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1548
LEAP-Seq percent confirming:80.8511
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACGTGAATGTCGCTTCA
Suggested primer 2:CAGCTCCGTTGTCTTCTGGT