Insertion junction: CLIP2.055027_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055027
Chromosome:chromosome 9
Location:6341796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGTCGAGACAGATCTTGCCCAGCAGGCGCGCGCCCAAAAGGGCGGGA
Internal bar code:CCAAACATTGGCAGGCTCAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1426
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCGTGTCACCCACCAAC
Suggested primer 2:GTATGACCCGCCTAACTCCG