Insertion junction: CLIP2.055029_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055029
Chromosome:chromosome 12
Location:4479402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520450 SGT1 Serine O-galactosyltransferase 1; (1 of 1) PTHR31485:SF7 - PEPTIDYL SERINE ALPHA-GALACTOSYLTRANSFERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCTGCACATAATCTCTGACACAGCAGCTAACCGCCCCTCCACCGTCA
Internal bar code:GCGCGGCTATGGTGGTACTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1136
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAACACGACATGAAGGA
Suggested primer 2:TCAGGTACGCGGCGTATAAC