Insertion junction: CLIP2.055036_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055036
Chromosome:chromosome 14
Location:2360669
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g623125 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGCAACCGCGCCTTTCACCCCGGCAATCAGCCCGGCACACCGTGCCGG
Internal bar code:GGGGGTGAGTTGAGTTTGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3549
LEAP-Seq percent confirming:19.7802
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:73
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGTGCTGCGTGTTTGTA
Suggested primer 2:CGCCACAGTTAACGACAAGC