Insertion junction: CLIP2.055040_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055040
Chromosome:chromosome 12
Location:8399205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g550350 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGGCCGGGTCGGCGGGGGAGGAGGAGAGGATGCGGGAGGAGGGGAAG
Internal bar code:TATTATAAGGATCTCTTTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2794
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGACGTGGTGGATGTGAT
Suggested primer 2:GATGTGGTTCACGCTCTTGC