Insertion junction: CLIP2.055046_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055046
Chromosome:chromosome 2
Location:6885196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388726 (1 of 1) 3.1.3.32 - Polynucleotide 3'-phosphatase / 2'(3')-polynucleotidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCACCTGACTGCTAGCTCCCGCCCTGTGCCCTGATCTTCAACTAACCA
Internal bar code:ATCGTATGAATAAGAGGCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3475
LEAP-Seq percent confirming:94.3396
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTGCTAGTTGCCCTAA
Suggested primer 2:TCCATGATGGAGTCGATGCG