Insertion junction: CLIP2.055057_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055057
Chromosome:chromosome 7
Location:3772680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338400 (1 of 1) K14845 - RAT1-interacting protein (RAI1, DOM3Z) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTTGTGCGTCAGTGCCACGCGTCAGGACACCGGGGCTGAGGTGGAGG
Internal bar code:ATGCAATAAAGCGGGGACGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1082
LEAP-Seq percent confirming:89.7959
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAGAGTAGACGAGGCGGC
Suggested primer 2:AAGCACCAGGTCCAACCAAA