Insertion junction: CLIP2.055060_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055060
Chromosome:chromosome 3
Location:1342794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150650 (1 of 2) PTHR12775:SF0 - PROTEIN RTF2 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGACCCACCCGTGGGGTTCACAGGGATGCTCTCGAGCTCCGCCAGCTT
Internal bar code:GTCTGGGACCGTGCGGTCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2088
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGTCAACCCGGAAGAGG
Suggested primer 2:GCAGCAGAACGTCTCCTTCT