Insertion junction: CLIP2.055060_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055060
Chromosome:chromosome 3
Location:1342798
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150650 (1 of 2) PTHR12775:SF0 - PROTEIN RTF2 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGGGATGCAAGAGGCGTAAAAGGGGTTGATGAGGTGGACTGTACG
Internal bar code:GGCAATATCTGTGACGCTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1698
LEAP-Seq percent confirming:53.5714
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAGAACGTCTCCTTCT
Suggested primer 2:GAAGGTCAACCCGGAAGAGG