Insertion junction: CLIP2.055071_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055071
Chromosome:chromosome 13
Location:4901501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605350 (1 of 9) PTHR11258//PTHR11258:SF11 - 2-5 OLIGOADENYLATE SYNTHETASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGACACGGTGGGGGTGTGACATCGGTTGCGCGGTGCACCCGTAACAC
Internal bar code:TTGGGGTCAGCCTTCAGGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2847
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTATCAAGCTAGCGAGGGCG
Suggested primer 2:CTTACGATCCCGCTGATCCC