Insertion junction: CLIP2.055087_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055087
Chromosome:chromosome 12
Location:5965046
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATGAGGTCCCGCGCCACCCAGCCCGCGAACCTTTGAGCCGTGGACGC
Internal bar code:TGCGTGTACTACTCTATTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2337
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGGATCAGTTGCGGAAC
Suggested primer 2:CATCGTTTCCGTCCGATTGC