Insertion junction: CLIP2.055090_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055090
Chromosome:chromosome 11
Location:2470182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095114 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGCCCGACACGCTGCCTGTCCGACTGCGTCCTAACCTCGTACACATG
Internal bar code:GGCACCCCGGGGGCGACTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3003
LEAP-Seq percent confirming:67.3913
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACGGCCTTAGCACCCAG
Suggested primer 2:TCGCTCTTCTGCATTGGGTT