Insertion junction: CLIP2.055091_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055091
Chromosome:chromosome 10
Location:1138157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425501 (1 of 1) K03125 - transcription initiation factor TFIID subunit 1 (TAF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTAGCCATTCCGCACACATCTCCAACTTCGTTTTCAACTCCCAAGTCT
Internal bar code:GGAGCTCGAATATTAGTGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2446
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACACACATCACACCAC
Suggested primer 2:GACGATGATGACGACGACGA