Insertion junction: CLIP2.055100_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055100
Chromosome:chromosome 12
Location:2482059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507350 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGGGCAGGTCCACGCCAGCAACCGCGCCCACACCCGCGCCGCCGCC
Internal bar code:TTCGTCAGTTGTGGTCTTCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1174
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACAGAGTACAAGTCCGT
Suggested primer 2:GCCTCCTGTTCACTAGCGTT