Insertion junction: CLIP2.055102_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055102
Chromosome:chromosome 17
Location:5203919
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g737050 (1 of 1) PTHR22957//PTHR22957:SF287 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAGTCCTGTAGCGAGGAAGGAAGCACCGGCAAGAAGGCAATGAGGGT
Internal bar code:GTTGTGGTAATACTCACACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:657
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGGTACCACCACTCGGA
Suggested primer 2:GCGCATCTCAATCTGGCAAG