Insertion junction: CLIP2.055117_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055117
Chromosome:chromosome 6
Location:2772325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271400 PGP3 (1 of 3) 3.1.3.18 - Phosphoglycolate phosphatase; Phosphoglycolate phosphatase/4-nitrophenylphosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGAGAGGACAGGATATTTGAAGGGCATGCCAGGTGTACAACGTGGG
Internal bar code:TGTCGGGCCGTGTGTCGAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1315
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCAAACCGTCGGGCATC
Suggested primer 2:CACATCGATTGCTGCTGACG