Insertion junction: CLIP2.055120_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055120
Chromosome:chromosome 3
Location:717479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145907 (1 of 1) 2.1.1.205 - tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCTCGTGCACGTACACACGCACGTGCACATATGTGCACATACGCACA
Internal bar code:CAGGGAAAGGGCGATATCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1296
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCCACCTCGGAAGATCT
Suggested primer 2:ACGTACCTTGGCTCCAATGG