Insertion junction: CLIP2.055126_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055126
Chromosome:chromosome 3
Location:8571519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210737 (1 of 726) IPR011009 - Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGATGGCAAATTTCGGACCCGCCCACAGTTGCCGTCCGATGCGCCAT
Internal bar code:AGTAGTGTAGTTGGGCGCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1746
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCATGGACAGCAGTAAG
Suggested primer 2:CACCTCGTATCGGGTTACGG