Insertion junction: CLIP2.055131_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055131
Chromosome:chromosome 7
Location:1046272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319800 (1 of 1) IPR000104//IPR009148 - Antifreeze protein, type I // Streptococcal non-M secreted SibA 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAACCCAGTGCGGCATCAAACCGTACTCACGAAATTTTCTAAAATACA
Internal bar code:GCAGCAGATCATGCTAGGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAAGTCAAAGGCAGTCG
Suggested primer 2:CATCCATGCATCGGCCTACT