Insertion junction: CLIP2.055131_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055131
Chromosome:chromosome 10
Location:3725593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801156 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGTCCGGTGACGGCGCCCTCAGTGATGCCGAGCTGATGGCAGCGCT
Internal bar code:TTCTTCACATGCGGAACTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2765
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATCAGGCCTTGGAGGTA
Suggested primer 2:GTCCTGCAACTGGAGAGCTT