Insertion junction: CLIP2.055137_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055137
Chromosome:chromosome 13
Location:4661626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603950 CYN50,CYN14 Cyclophilin 50; (1 of 2) IPR002130//IPR029000 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain // Cyclophilin-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGTCAGGGTCGGTTATGGAGGGTGGCGGGCACCACTCTGGGTTGCTT
Internal bar code:AACCTAACCGCTCGTAATGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:752
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTGCATGGGGGTTAAGA
Suggested primer 2:CAGGCAAAAACACCCTCTGC