Insertion junction: CLIP2.055144_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055144
Chromosome:chromosome 2
Location:3524241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099100 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP); RCC-type HECT ubiquitin ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCCCAGCACCACTATGCGTGTTCTGTGTGGTGTTTGCGACCGCTTTC
Internal bar code:TTAGGGGGAAGAAAAACTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3819
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGTGGTCATGCCTGCCAG
Suggested primer 2:CACTGTGCGTGTTCTGTGTG