Insertion junction: CLIP2.055163_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055163
Chromosome:chromosome 2
Location:1500828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084100 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGAAGCCTGAGACTCGGCGATACAGACACTGGCGACGGCGTGTTCGT
Internal bar code:CCACGATTGGAAGTGTCTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2128
LEAP-Seq percent confirming:17.9487
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGTGAGCGCAGGTATG
Suggested primer 2:TCAGAGGTGTGAAAGGCGAC