Insertion junction: CLIP2.055163_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055163
Chromosome:chromosome 2
Location:1500832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084100 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTTGCGACCCCAGCGCATCGGCAAGCCTGCGCAGGTGCTCATCGCGG
Internal bar code:CCACGATTGGAAGTGTCTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1256
LEAP-Seq percent confirming:47.7273
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGAGGTGTGAAAGGCGAC
Suggested primer 2:GCATTGTGAGCGCAGGTATG