Insertion junction: CLIP2.055165_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055165
Chromosome:chromosome 3
Location:6813417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197250 (1 of 1) PTHR13948//PTHR13948:SF25 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCTGCAGCCATGCGCAAAGCGCCTGTCAGCACCTGATGCGAGTGGCC
Internal bar code:TTTTTAAGATGCACGGAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3048
LEAP-Seq percent confirming:39.4737
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGGAAAGGACAGAACCA
Suggested primer 2:GGAGGAAGTCCACGGTTCAG