Insertion junction: CLIP2.055170_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055170
Chromosome:chromosome 16
Location:2048277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657000 (1 of 1) K03134 - transcription initiation factor TFIID subunit 10 (TAF10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTACTCCGGGCCGCTCCACCCGGCGGCCCCGGACCTCACTGAGCGACT
Internal bar code:TATTTTTGCAAACCACAGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3057
LEAP-Seq percent confirming:92.4528
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTGTGAGTGTGTGCAGG
Suggested primer 2:GCGTTATGAAGCGTGCAGAG