Insertion junction: CLIP2.055172_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055172
Chromosome:chromosome 8
Location:1137392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCAGGCGAACTCCGGGTCCGTTTCCGGCAGCCCCGCCAGCTTTTTGA
Internal bar code:AATAAAGGGGGGGTCGGCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2634
LEAP-Seq percent confirming:48.3871
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACAAGGCCCACGTCAAG
Suggested primer 2:GATGACGGCTCTGACCTAGC