Insertion junction: CLIP2.055180_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055180
Chromosome:chromosome 6
Location:6270828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292450 PUS13 RNA pseudouridine synthase; (1 of 1) 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGGACCGGGCGTACTTCAGCAAGGAGTCGTACGACACGGCACGTGCC
Internal bar code:GTGGATACCCTAGAGGCGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:492
LEAP-Seq percent confirming:1.88679
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAAGACCTGAAGCCGAA
Suggested primer 2:GGCTTCCTGATGCACCAGAT