Insertion junction: CLIP2.055190_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055190
Chromosome:chromosome 5
Location:202450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242856 (1 of 5) PTHR10795//PTHR10795:SF157 - PROPROTEIN CONVERTASE SUBTILISIN/KEXIN // MEMBRANE-BOUND TRANSCRIPTION FACTOR PEPTIDASE, SITE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGACAAACCGACAAAGTCCGAACCGCGAAGGCAGTGCGGTGCGGCCCT
Internal bar code:AACGAGCAATGAAAACTGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCAAGCTGAGTTTTGTGG
Suggested primer 2:AGTGTCGCTCTAAGCCCCTA