Insertion junction: CLIP2.055192_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055192
Chromosome:chromosome 17
Location:3704508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725950 CSR13 (1 of 3) K08106 - N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase (CHST15); Carbohydrate sulfotransferase-related 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGAGCAGCGCCTTGCACGATTGCTCGACGGCGGTGCACATACGGCCGT
Internal bar code:CCCGAGTTCCTGTGATTTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:320
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAACGCTTTTGCCCCATG
Suggested primer 2:TGTACTTGCCGGTTACCCAC